| # | Equipo | PJ | G | E | P | GF | GC | DG | Pts | Forma |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 |
 Albirex Niigata |
16 | 10 | 2 | 4 | 23 | 24 | -1 | 32 | W W L W W |
| 2 |
 Yokohama FC |
16 | 9 | 4 | 3 | 32 | 17 | 15 | 31 | W W W D W |
| 3 |
 Kataller Toyama |
16 | 9 | 4 | 3 | 29 | 15 | 14 | 31 | W W W L W |
| 4 |
 Vegalta Sendai |
16 | 9 | 3 | 4 | 28 | 15 | 13 | 30 | W L L L W |
| 5 |
 Omiya Ardija |
16 | 8 | 6 | 2 | 30 | 18 | 12 | 30 | W W W D L |
| 6 |
 Tegevajaro Miyazaki |
16 | 8 | 5 | 3 | 26 | 17 | 9 | 29 | W W W W W |
| 7 |
 Consadole Sapporo |
16 | 8 | 2 | 6 | 22 | 19 | 3 | 26 | W W W W W |
| 8 |
 Iwaki |
16 | 7 | 2 | 7 | 26 | 22 | 4 | 23 | W L W D D |
| 9 |
 Jubilo Iwata |
16 | 6 | 5 | 5 | 19 | 17 | 2 | 23 | D W W D D |
| 10 |
 Shonan Bellmare |
16 | 5 | 8 | 3 | 16 | 15 | 1 | 23 | D L L W D |
| 11 |
 Oita Trinita |
16 | 5 | 7 | 4 | 19 | 14 | 5 | 22 | L W L D D |
| 12 |
 Blaublitz Akita |
16 | 5 | 5 | 6 | 18 | 18 | 0 | 20 | W L D W L |
| 13 |
 Sagan Tosu |
16 | 6 | 2 | 8 | 16 | 19 | -3 | 20 | L W L W L |
| 14 |
 Montedio Yamagata |
16 | 6 | 1 | 9 | 14 | 16 | -2 | 19 | L W W L L |
| 15 |
 Tokushima Vortis |
16 | 5 | 2 | 9 | 12 | 17 | -5 | 17 | L L L W L |
| 16 |
 Fujieda MYFC |
16 | 3 | 7 | 6 | 17 | 21 | -4 | 16 | L L D L D |
| 17 |
 Vanraure Hachinohe |
16 | 4 | 2 | 10 | 11 | 26 | -15 | 14 | L L L L W |
| 18 |
 Tochigi City |
16 | 3 | 3 | 10 | 21 | 31 | -10 | 12 | L L L L D |
| 19 |
 Imabari |
16 | 3 | 3 | 10 | 16 | 32 | -16 | 12 | L L D L L |
| 20 |
 Ventforet Kofu |
16 | 3 | 3 | 10 | 12 | 34 | -22 | 12 | L L D D L |
