| # | Equipo | PJ | G | E | P | GF | GC | DG | Pts | Forma |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 |
 Arminia Bielefeld |
38 | 21 | 9 | 8 | 64 | 36 | 28 | 72 | W W D W W |
| 1 |
 FC Viktoria Köln |
13 | 9 | 2 | 2 | 36 | 18 | 18 | 29 | W W W D D |
| 2 |
 MSV Duisburg |
13 | 9 | 2 | 2 | 33 | 18 | 15 | 29 | W D L D W |
| 2 |
 Dynamo Dresden |
38 | 20 | 10 | 8 | 71 | 40 | 31 | 70 | W L D W W |
| 3 |
 FC Saarbrücken |
38 | 18 | 11 | 9 | 59 | 47 | 12 | 65 | W L W W L |
| 3 |
 Rot-Weiß Essen |
13 | 8 | 3 | 2 | 21 | 13 | 8 | 27 | W W W L W |
| 4 |
 Energie Cottbus |
38 | 18 | 8 | 12 | 64 | 54 | 10 | 62 | L W L D W |
| 4 |
 SV Wehen |
13 | 6 | 3 | 4 | 26 | 17 | 9 | 21 | W W W D W |
| 5 |
 FC Ingolstadt 04 |
13 | 6 | 3 | 4 | 19 | 19 | 0 | 21 | W D W W W |
| 5 |
 Hansa Rostock |
38 | 18 | 6 | 14 | 54 | 46 | 8 | 60 | L L W W W |
| 6 |
FC Viktoria Köln |
38 | 18 | 5 | 15 | 59 | 48 | 11 | 59 | W W L W L |
| 6 |
FC Saarbrücken |
13 | 6 | 2 | 5 | 31 | 26 | 5 | 20 | L W L W L |
| 7 |
 Verl |
38 | 15 | 12 | 11 | 62 | 55 | 7 | 57 | W D L W D |
| 7 |
 Alemannia Aachen |
13 | 6 | 2 | 5 | 19 | 19 | 0 | 20 | L W W W L |
| 8 |
Rot-Weiß Essen |
38 | 16 | 8 | 14 | 55 | 54 | 1 | 56 | D W W L W |
| 8 |
 Waldhof Mannheim |
13 | 6 | 1 | 6 | 23 | 20 | 3 | 19 | W L W L L |
| 9 |
Hansa Rostock |
13 | 5 | 4 | 4 | 22 | 22 | 0 | 19 | W L D L L |
| 9 |
SV Wehen |
38 | 15 | 10 | 13 | 59 | 60 | -1 | 55 | W W W L W |
| 10 |
FC Ingolstadt 04 |
38 | 14 | 12 | 12 | 72 | 63 | 9 | 54 | W L L L L |
| 10 |
 SV Meppen |
13 | 5 | 3 | 5 | 18 | 18 | 0 | 18 | W D W D W |
| 11 |
 TSV 1860 München |
38 | 15 | 8 | 15 | 57 | 61 | -4 | 53 | D D L L W |
| 11 |
 Stuttgart II |
13 | 5 | 3 | 5 | 22 | 23 | -1 | 18 | W D L W W |
| 12 |
 Hoffenheim II |
12 | 5 | 1 | 6 | 21 | 20 | 1 | 16 | L L W L L |
| 12 |
Alemannia Aachen |
38 | 12 | 14 | 12 | 44 | 44 | 0 | 50 | L W L W L |
| 13 |
 Fortuna Düsseldorf |
13 | 4 | 4 | 5 | 14 | 17 | -3 | 16 | L D D L W |
| 13 |
 Erzgebirge Aue |
38 | 15 | 5 | 18 | 52 | 65 | -13 | 50 | D L W L W |
| 14 |
 Preußen Münster |
13 | 4 | 3 | 6 | 21 | 25 | -4 | 15 | L L W L L |
| 14 |
 VfL Osnabrück |
38 | 13 | 9 | 16 | 46 | 55 | -9 | 48 | L L W L W |
| 15 |
 Würzburger Kickers |
12 | 4 | 2 | 6 | 17 | 24 | -7 | 14 | W L W D L |
| 15 |
Stuttgart II |
38 | 12 | 11 | 15 | 49 | 59 | -10 | 47 | D W W D D |
| 16 |
 SSV Jahn Regensburg |
13 | 3 | 4 | 6 | 23 | 23 | 0 | 13 | L W L D D |
| 16 |
Waldhof Mannheim |
38 | 11 | 13 | 14 | 43 | 45 | -2 | 46 | L W W D D |
| 17 |
 Borussia Dortmund II |
38 | 11 | 10 | 17 | 53 | 60 | -7 | 43 | L L L L L |
| 17 |
Verl |
13 | 3 | 3 | 7 | 17 | 27 | -10 | 12 | L L L L D |
| 18 |
 SG Sonnenhof Grossaspach |
13 | 3 | 3 | 7 | 13 | 29 | -16 | 12 | L L L W D |
| 18 |
 Hannover 96 II |
38 | 9 | 10 | 19 | 51 | 70 | -19 | 37 | W L D W D |
| 19 |
 SV Sandhausen |
38 | 9 | 8 | 21 | 49 | 69 | -20 | 35 | L W L L L |
| 19 |
 Fortuna Köln |
13 | 2 | 4 | 7 | 10 | 16 | -6 | 10 | L L L L L |
| 20 |
 SpVgg Unterhaching |
38 | 4 | 13 | 21 | 40 | 72 | -32 | 25 | L L L D D |
| 20 |
 Havelse |
13 | 2 | 4 | 7 | 17 | 29 | -12 | 10 | L D W D D |
